Hello, and welcome to my personal “research blog,” on Persagen.com!

This forum will provide the occasional opportunity to share some of my thoughts regarding my scientific and technical passions: molecular genetics, cancer research, natural language computing, computational linguistics, information extraction/retrieval, knowledge stores, knowledge graphs, knowledge discovery, etc.

On a personal note, appended below is a list of some of the “Research News” topics that I follow through various sources: scientific journals, science and technical online sources (RSS), etc. I email the most informative ones [Claws Mail: searchable with mairix (man page], and have been doing so for many years.

Currently, this content exceeds 400 folders (with most of the content cross-referenced through Subject lines and threaded content), containing ~68,500+ articles.

If you have any comments on Persagen.com,  my vision or my work please do not hesitate to contact me!

Sincerely,

Victoria


Dr. Victoria A. Stuart, Ph.D.
Vancouver, B.C.

E-mail:
@Persagen
@gmail

Pusheen - Dance.gif


2017-09-02

[victoria@victoria 2_RESEARCH - NEWS]$ dp   ## ~/.bashrc alias (d: date; p: pwd)

    Sat Sep  2 11:52:41 PDT 2017
    /home/victoria/Mail/2_RESEARCH - NEWS

[victoria@victoria 2_RESEARCH - NEWS]$ ls | sort

  Acoustics
  Ageing
  Ageing - Calorie (Dietary) Restriction
  Agriculture, Aquaculture, Fisheries
  Ancient DNA; Ancient Protein
  Anthropology, Archaeology
  Transcriptome - RNA-seq
  ...
  [SNIP! Deleted 2018-06-06 after updated list appended, below.]
  ...
  Translational Science, Medicine
  Transposons
  USACEHR-Relevant Literature
  Vaccines
  Vision, Eyes, Sight
  Wasps
  Women in Science, Medicine

[victoria@victoria 2_RESEARCH - NEWS]$ ls | wc -l
    402

[victoria@victoria 2_RESEARCH - NEWS]$ ls -R | wc -l
    66558

[victoria@victoria 2_RESEARCH - NEWS]$

Update: 2018-06-06

[victoria@victoria 2_RESEARCH - NEWS]$ dp     ## ~/.bashrc aliases -- d: date; p: pwd

	Wed Jun  6 15:56:40 PDT 2018
	/home/victoria/Mail/2_RESEARCH - NEWS

[victoria@victoria 2_RESEARCH - NEWS]$ ls -l * | wc -l

  ## ~70K folders, files (emails):
  68647

[victoria@victoria 2_RESEARCH - NEWS]$ ls -l  | wc -l

  ## ~410 interest areas:
  408

[victoria@victoria 2_RESEARCH - NEWS]$ ls -l | head

  total 2.4M
  drwx------ 2 victoria victoria 4.0K Mar 29 09:29 Acoustics
  drwx------ 2 victoria victoria  20K Jun  6 15:10 Ageing
  drwx------ 2 victoria victoria 4.0K May 21 11:44 Ageing - Calorie (Dietary) Restriction
  drwx------ 2 victoria victoria 4.0K Mar 29 09:29 Ageing - Senescence
  drwx------ 2 victoria victoria 4.0K Mar 29 09:29 Agriculture, Aquaculture, Fisheries
  drwx------ 2 victoria victoria 4.0K Mar 29 09:29 Ancient DNA; Ancient Protein
  drwx------ 2 victoria victoria  20K Mar 29 09:29 Anthropology, Archaeology
  drwx------ 2 victoria victoria 4.0K Mar 29 09:29 Ants
  drwx------ 2 victoria victoria 4.0K Mar 29 09:29 Archaeology

[victoria@victoria 2_RESEARCH - NEWS]$ ls -l | sed -r -e 's/\drwx------ 2 victoria victoria.*:[0-9]{2}\s//g'

  total 2356
  Acoustics
  Ageing
  Ageing - Calorie (Dietary) Restriction
  Ageing - Senescence
  Agriculture, Aquaculture, Fisheries
  Ancient DNA; Ancient Protein
  Anthropology, Archaeology
  Ants
  Archaeology
  ARO-Relevant Literature, News
  arXiv, bioRxiv, viXra
  Avian Flu
  Bees - CCD
  Bees - Genomics, Genetics
  Bees - Misc
  Biochemistry
  Bioengineering (tissues ...), Regenerative Medicine
  Bioinformatics, Computational Biology
  Bioinformatics, Informatics - Job Requirements
  Bioinformatics - Online Degrees
  Bioinformatics - Online - JHU
  Bioinformatics - Training
  Biology
  Biomarkers
  Biophysics
  Biotech
  Biotech Companies
  Bioterrorism, Biothreats, Biowar
  Birds - Crows, Corvids, Ravens
  Blogs - Scientific
  Blood, Blood Disorders, Cardiac Health
  Business, Industry
  Canada - Research-Related
  Cancer
  Cancer - Genomic Variants
  Cancer - Metastasis (EMT Transition ...)
  Cancer Pathways, Networks
  Careers
  Catabolism - Autophagy; Phagosomes; Mitophagy
  Catabolism - Lysosomes
  Catabolism - Miscellaneous
  Catabolism - Proteasome
  Causality; Causal Relationships
  Cell Biology
  Cell Biology - Cell Lines
  Cell Biology - Golgi
  Cell Death - Apoptosis
  Cell Death - Ferroptosis
  Cell Death - Necroptosis [RIP1, RIP3, TNFα, ...]
  Cell Death - Necrosis
  Cell Death - Parthanatos
  Cellular Growth & Development - General
  Cellular Growth - Spatial (3D); Physical (mechanical force, stress)
  Cellular, Metabolic Reprogramming
  Cellular Signaling - Channels
  Cellular Signaling - EGFR
  Cellular Signaling - G-Proteins, GPCR
  Cellular Signaling - HER2
  Cellular Signaling - Hippo Pathway
  Cellular Signaling - Immediate Early Genes
  Cellular Signaling - Insulin-IGF Pathway
  Cellular Signaling - MAPK-ERK Pathway
  Cellular Signaling - Miscellaneous
  Cellular Signaling - mTOR, mTORC1, mTORC2
  Cellular Signaling - Noise
  Cellular Signaling - Notch
  Cellular Signaling - p16-cyclin D Pathway
  Cellular Signaling - p38 MAPK (Stress Pathway)
  Cellular Signaling - PGC-1α Pathway
  Cellular Signaling - PI3K-Akt Pathway
  Cellular Signaling - PIK3CA
  Cellular Signaling - PINK1-parkin Pathway
  Cellular Signaling - PTEN
  Cellular Signaling - Ras, KRAS Pathways
  Cellular Signaling - Ras-MAPK Pathway
  Cellular Signaling - Receptors
  Cellular Signaling - Receptors - TRPV1, TRPA1 ...
  Cellular Signaling - SNAIL
  Cellular Signaling - Sonic Hedgehog (SHH) Pathway
  Cellular Signaling - STAT3
  Cellular Signaling - STAT5
  Cellular Signaling - Synthetic
  Cellular Signaling - TGFβ Signaling Pathway
  Cellular Signaling - Wnt-β-Catenin Pathway
  Chaos
  Chemistry
  Chemistry - Biological Chemistry
  Chemistry - Graphene
  Chemistry - Green
  Chemoprevention
  Chemoprevention - Resveratrol
  Chemoprevention - Resveratrol - Detrimental
  Climate Change - Extinction
  Climate Change - Extreme Weather; Droughts
  Climate Change - Food Production, Availability
  Climate Change - General
  Climate Change - Ozone
  Clinical Trials
  Coagulopathy
  Cognition
  Computing - Cloud Computing
  Computing - General
  Computing - Quantum Computing
  Computing - Software
  Corpora
  Crowdsourced Science
  Cryoprotection
  Cyberwarfare
  Deep Learning, Neural Networks
  Diet - Antioxidants, Flavonoids, Polyphenols
  Diet - Antioxidants, Flavonoids, Polyphenols - Detrimental
  Diet - Apples
  Diet - Calcium
  Diet - Celiac (Coeliac) Disease
  Diet - Cereals
  Diet - Cheese
  Diet - Chocolate
  Diet - Coffee, Tea
  Diet - Detrimental (Grapefruit juice, ...)
  Diet - Fats & Oils
  Diet - Fats - Omegas
  Diet - Fats - Omegas - Negative Effects
  Diet - Fiber
  Diet - Fish
  Diet - Food Guides
  Diet - Fruit, Vegetables, Berries
  Diet - Grains
  Diet - HCA (Heterocyclic Amines)
  Diet - Herbs
  Diet - Herbs - Detrimental
  Diet - HFCS (glucose-fructose in Canada)
  Diet - Honey
  Diet - Intermittent Fasting; 5:2 Diet
  Diet - Junk Food
  Diet - Meat
  Diet - Miscellaneous
  Diet - Nutrigenomics, Nutrition
  Diet - Nuts
  Diet - Organic
  Diet - Protein
  Diet - Salt, Hypertension
  Diet - Specific Diets (Mediterranean; ...)
  Diet - Spices
  Diet - Sugar, Carbohydrate (NOT HFCS)
  Diet - Supplements - Detrimental
  Diet - Supplements, Vitamins
  Diet - Sweeteners [Splenda; Stevia; ...]
  Diet - Vitamin D
  Diet - Vitamin E
  Diet - Wine
  DNA Damage
  DNA - Information Storage
  DNA - Misc
  DNA Repair
  DNA - Repeat Sequences [not telomeres]
  DNA Sequencing
  Dogs, Wolves
  Ecology; Environment - General
  Endocrine Disruptors
  Energy - Alternative (fuel cells; ...)
  Energy - Biofuels (incl. EtOH)
  Energy - Coal, Oil, Other Natural Resources
  Energy - Incandescent Bulb Phase-out
  Energy - Miscellaneous
  Energy - Nuclear Power
  Environment - Alberta Oil Sands
  Environmental Disasters
  Environmental Disasters - BP Oil Spill
  Environmental Disasters - Chernobyl (Chornobyl)
  Environmental Disasters - China
  Environmental Disasters - Haiti - Cholera
  Environmental Disasters - Hydrofracking
  Environmental Disasters - Japan 2011
  Environmental Health, Toxicology
  Environment - Pollution
  Environment - Waste Management
  Epidemiology
  Epigenetics; DNA Methylation; Transgenerational Effects
  Ethics & Fraudulent Science
  Evolution
  Evolution - Speciation
  Exposome
  Forensic Science, Medicine
  Gene Expression
  Gene Therapy
  Genetic Engineering
  Genetic Engineering - CRISPR RNA-Guided Cas9 Nuclease, TALENs, TALEs
  Genetic Engineering - Gene Drive
  Genetic Engineering - MAGE, CAGE
  Genetic Regulation
  Genetics - De-extinction
  Genetics - Miscellaneous
  Genetic Testing
  GenMAPP 2
  Genomes - Individual
  Genomes - Intra-Individual Variation
  Genomics
  Genomics - Cancer Genomes; TCGA; ...
  Genomics Databases
  Genomics - ENCODE, deCODE
  Genomics - FANTOM
  Genomics - Functional
  Genomics - Functional - XIST
  drwx------ 2 victoria victoria  4096 Aug 26  2015 Genomics - Gene Drive
  Genomics - GenomeBC, Genome Canada
  Genomics - Horizontal Gene, Disease Transfer
  Genomics - Metagenomics
  Genomics - Mosaicism
  Genomics - Penetrance
  Genomics - PPM (Personalized & Precision Medicine)
  Genomics - Privacy
  Genomics - Whole-Genome; Exome
  Geology
  Glycans, Glycoproteins, Carbohydrates
  Grants, Science Funding
  Graph Theory, Graphical Models
  Guides - Posters, Talks, Authorship, Review
  Hair, Skin
  Health - Addiction, Alcohol, Nicotine, Drug Abuse ...
  Health - Addiction - Vancouver Insite
  Health - Bone
  Health Care
  Health - Disease
  Health - Disease - Financial Cost
  Health - Disease - Genomic Variants
  Health - Exercise, Diet
  Health - Exercise - Yoga
  Health - Female
  Health - Helminths (parasitic worms)
  Health - Human-Related 'Horizontal' Disease Transfer
  Health - Infants, Juveniles
  Health - Male
  Health - Racial, Cultural, Geographic Differences
  Health - Sex Differences; Sexual Dimorphism
  Health - Skin
  Health - Surgery
  Health - Transgender
  Heterogeneity - Cellular, Genomic
  HIV, AIDS
  Hormones
  Illusion - Optical, ...
  Imaging - Quantum Dots
  Imaging Technology
  Immunity, Inflammation - General
  Immunity, Inflammation - Sepsis
  Immunity - TLR (Toll-Like Receptors)
  Information Theory
  Injury, Trauma, Pain, Treatment
  Intelligence - AI - General (Artificial Intelligence, A.I.)
  Intelligence - AI - IBM Watson
  Intelligence - Biological
  Interactomes
  Journals - Access
  Journals - Misc
  Journals - Quality, Peer Review ...
  Junk DNA (lncRNA, vlincRNA, ...), Pseudogenes ...
  Kinases, Phosphatases
  Language
  Lists2Networks
  Materials Science
  Materials Science - Biosensors; Sensors
  Materials Science - Plasmonic, Photonic
  Mathematics - Fractals
  Mathematics - General; Logic
  Mathematics - PDE (Partial Differential Equations)
  Membranes
  Metabolism - Amino Acids
  Metabolism - AMPK
  Metabolism - Blood, Cardiovascular
  Metabolism - Carbohydrate, Sugar
  Metabolism - Cilia, Intraflagellar Transport, Tubulin
  Metabolism - Circadian Rhythms; Chronobiology
  Metabolism - Copper
  Metabolism - Diabetes
  Metabolism - DNA (Replication, ...)
  Metabolism - Energy [not Metabolic Syndrome]
  Metabolism - Glymphatic System
  Metabolism - Iron
  Metabolism - Lipids, Fatty Acids
  Metabolism - Metabolizers (Individual Differences)
  Metabolism - Miscellaneous
  Metabolism - Models
  Metabolism - NAD+, NADH, NADPH
  Metabolism - Obesity, Metabolic Disease
  Metabolism - Proteins
  Metabolism - Sleep
  Metabolome
  Microarrays
  Microbes - Archaebacteria; Extremophiles
  Microbes - Behavior Caused By
  Microbes - Biofilms, Quorum Sensing
  Microbes - Bioremediation
  Microbes - E. coli outbreak - Europe 2011
  Microbes - Fecal Microbial Transplantation (FMT)
  Microbes - Fungi, Yeast
  Microbes - Microbial Forensics
  Microbes - Microbiome
  Microbes - Microbiome - Nonhuman
  Microbes - Miscellaneous
  Microbes - Pathogens, Parasites
  Microbes - Pathogens, Parasites - Ebola
  Microbes - Probiotic
  Microbes - Virome
  Microbes - Viruses
  Microfluidics
  Military, Terrorism
  Mitochondria; Mitochondrial Genetics, Disease
  mRNA Display
  Music - Science-Related
  Mutation (Mutagenesis, Mutation Rates; ...)
  Mutation - Silent (Synonymous, 'Neutral')
  Nanoparticles
  Nanotechnology
  Network Modelling - Metabolic
  Neuroscience - Connectome
  Neuroscience - Memory, Learning
  Neuroscience, Neurobiology
  NGS - de novo Assembly
  NGS (Next-Generation Sequencing)
  NLM - Correspondence (PubMed, PMC ...)
  NLM - PubMed, PMC ...
  Oceanography
  ODE (Ordinary Differential Equations)
  OHS (Occupational Health & Safety)
  'Omics - Single-Cell
  'Omics - Various Other
  Ontologies [Gene Ontology ...]
  Optogenetics
  Origin of Life
  Pathway Analysis - Various
  Pathway Interaction Database
  PCR - Methods
  Peer Review; Open Science
  People - Craig Venter
  People - George Church
  People - Michael P. Snyder
  People - Noam Chomsky
  Pharmaceutical
  Pharmaceutical - Ibuprofen
  Pharmaceutical - Metformin
  Phenome
  Pheromones
  Phylogeny
  Physics
  Physics - Antimatter
  Physics - Holographic Universe
  Plants
  Plants - Genetics, Genomics
  Pollution
  Polymerases
  Privacy
  Proteins - Chaperones; Folding, Mis-Folding, HSP
  Proteins - Enzymes
  Proteins - Miscellaneous
  Proteins - Prions
  Proteome
  Psychology
  Psychology - Genetics
  Psychology - Light, Color
  Quantitative Biology
  RDF, Triples, Predications (PAS), SPARQL ...
  Ribosomes
  RNA - Exosomes
  RNA - mRNA; miRNA; siRNA; RNAi; crRNA; lncRNA; ...
  Robotics
  Rodents
  Rodents - Mole Rats
  Science Communication
  Science Policy
  Science, Research - Miscellaneous
  Senses - Smell; Olfaction; Taste, Hearing, Deafness; Touch
  SETI; Extra-Terrestrial Life
  Sex Determination, Gender Identity
  Sirtuins
  Social Media, Networking, Psychology, Trends ...
  Space, Cosmology
  Statistics, Probability
  Statistics - Shoddy
  Stem Cells
  Stress - Environmental (Heat; Cold; ...)
  Stress - Hypoxia; Anoxia
  Stress - Oxidative (ROS ...)
  Stress - Physiological, Cellular - ER Stress (Endoplasmic Reticulum)
  Stress - Physiological, Cellular - General
  Stress - PTSD
  Stress - UPR (Unfolded Protein Response)
  Synthetic Biology
  Synthetic Biology - Computing
  Synthetic Biology - Synthetic Life
  Systems Biology
  Telomeres; Telomere-Related Ageing
  Toxicology
  Transcription - Enhancers
  Transcription Factors - NF-κB (NFkB)
  Transcription Factors - Nrf2
  Transcription, Transcription Factors, Translation
  Transcriptome
  Transcriptome - CAGE
  Transcriptome - FISSEQ
  Transcriptome - RNA-seq
  Translational Science, Medicine
  Transposons
  USACEHR-Relevant Literature
  Vaccines
  Vision, Eyes, Sight
  Wasps
  Women in Science, Medicine

[victoria@victoria 2_RESEARCH - NEWS]$