Hello! 😃
Introduction
Hello, and welcome to my personal “research blog,” on Persagen.com!
This forum will provide the occasional opportunity to share some of my thoughts regarding my scientific and technical passions: molecular genetics, cancer research, natural language computing, computational linguistics, information extraction/retrieval, knowledge stores, knowledge graphs, knowledge discovery, etc.
On a personal note, appended below is a list of some of the “Research News” topics that I follow through various sources: scientific journals, science and technical online sources (RSS), etc. I email the most informative ones [Claws Mail: searchable with mairix (man page], and have been doing so for many years.
Currently, this content exceeds 400 folders (with most of the content cross-referenced through Subject lines and threaded content), containing ~68,500+ articles.
If you have any comments on Persagen.com, my vision or my work please do not hesitate to contact me!
Sincerely,
–
Dr. Victoria A. Stuart, Ph.D.
Vancouver, B.C.
2017-09-02
[victoria@victoria 2_RESEARCH - NEWS]$ dp ## ~/.bashrc alias (d: date; p: pwd) Sat Sep 2 11:52:41 PDT 2017 /home/victoria/Mail/2_RESEARCH - NEWS [victoria@victoria 2_RESEARCH - NEWS]$ ls | sort Acoustics Ageing Ageing - Calorie (Dietary) Restriction Agriculture, Aquaculture, Fisheries Ancient DNA; Ancient Protein Anthropology, Archaeology Transcriptome - RNA-seq ... [SNIP! Deleted 2018-06-06 after updated list appended, below.] ... Translational Science, Medicine Transposons USACEHR-Relevant Literature Vaccines Vision, Eyes, Sight Wasps Women in Science, Medicine [victoria@victoria 2_RESEARCH - NEWS]$ ls | wc -l 402 [victoria@victoria 2_RESEARCH - NEWS]$ ls -R | wc -l 66558 [victoria@victoria 2_RESEARCH - NEWS]$
Update: 2018-06-06
[victoria@victoria 2_RESEARCH - NEWS]$ dp ## ~/.bashrc aliases -- d: date; p: pwd Wed Jun 6 15:56:40 PDT 2018 /home/victoria/Mail/2_RESEARCH - NEWS [victoria@victoria 2_RESEARCH - NEWS]$ ls -l * | wc -l ## ~70K folders, files (emails): 68647 [victoria@victoria 2_RESEARCH - NEWS]$ ls -l | wc -l ## ~410 interest areas: 408 [victoria@victoria 2_RESEARCH - NEWS]$ ls -l | head total 2.4M drwx------ 2 victoria victoria 4.0K Mar 29 09:29 Acoustics drwx------ 2 victoria victoria 20K Jun 6 15:10 Ageing drwx------ 2 victoria victoria 4.0K May 21 11:44 Ageing - Calorie (Dietary) Restriction drwx------ 2 victoria victoria 4.0K Mar 29 09:29 Ageing - Senescence drwx------ 2 victoria victoria 4.0K Mar 29 09:29 Agriculture, Aquaculture, Fisheries drwx------ 2 victoria victoria 4.0K Mar 29 09:29 Ancient DNA; Ancient Protein drwx------ 2 victoria victoria 20K Mar 29 09:29 Anthropology, Archaeology drwx------ 2 victoria victoria 4.0K Mar 29 09:29 Ants drwx------ 2 victoria victoria 4.0K Mar 29 09:29 Archaeology [victoria@victoria 2_RESEARCH - NEWS]$ ls -l | sed -r -e 's/\drwx------ 2 victoria victoria.*:[0-9]{2}\s//g' total 2356 Acoustics Ageing Ageing - Calorie (Dietary) Restriction Ageing - Senescence Agriculture, Aquaculture, Fisheries Ancient DNA; Ancient Protein Anthropology, Archaeology Ants Archaeology ARO-Relevant Literature, News arXiv, bioRxiv, viXra Avian Flu Bees - CCD Bees - Genomics, Genetics Bees - Misc Biochemistry Bioengineering (tissues ...), Regenerative Medicine Bioinformatics, Computational Biology Bioinformatics, Informatics - Job Requirements Bioinformatics - Online Degrees Bioinformatics - Online - JHU Bioinformatics - Training Biology Biomarkers Biophysics Biotech Biotech Companies Bioterrorism, Biothreats, Biowar Birds - Crows, Corvids, Ravens Blogs - Scientific Blood, Blood Disorders, Cardiac Health Business, Industry Canada - Research-Related Cancer Cancer - Genomic Variants Cancer - Metastasis (EMT Transition ...) Cancer Pathways, Networks Careers Catabolism - Autophagy; Phagosomes; Mitophagy Catabolism - Lysosomes Catabolism - Miscellaneous Catabolism - Proteasome Causality; Causal Relationships Cell Biology Cell Biology - Cell Lines Cell Biology - Golgi Cell Death - Apoptosis Cell Death - Ferroptosis Cell Death - Necroptosis [RIP1, RIP3, TNFα, ...] Cell Death - Necrosis Cell Death - Parthanatos Cellular Growth & Development - General Cellular Growth - Spatial (3D); Physical (mechanical force, stress) Cellular, Metabolic Reprogramming Cellular Signaling - Channels Cellular Signaling - EGFR Cellular Signaling - G-Proteins, GPCR Cellular Signaling - HER2 Cellular Signaling - Hippo Pathway Cellular Signaling - Immediate Early Genes Cellular Signaling - Insulin-IGF Pathway Cellular Signaling - MAPK-ERK Pathway Cellular Signaling - Miscellaneous Cellular Signaling - mTOR, mTORC1, mTORC2 Cellular Signaling - Noise Cellular Signaling - Notch Cellular Signaling - p16-cyclin D Pathway Cellular Signaling - p38 MAPK (Stress Pathway) Cellular Signaling - PGC-1α Pathway Cellular Signaling - PI3K-Akt Pathway Cellular Signaling - PIK3CA Cellular Signaling - PINK1-parkin Pathway Cellular Signaling - PTEN Cellular Signaling - Ras, KRAS Pathways Cellular Signaling - Ras-MAPK Pathway Cellular Signaling - Receptors Cellular Signaling - Receptors - TRPV1, TRPA1 ... Cellular Signaling - SNAIL Cellular Signaling - Sonic Hedgehog (SHH) Pathway Cellular Signaling - STAT3 Cellular Signaling - STAT5 Cellular Signaling - Synthetic Cellular Signaling - TGFβ Signaling Pathway Cellular Signaling - Wnt-β-Catenin Pathway Chaos Chemistry Chemistry - Biological Chemistry Chemistry - Graphene Chemistry - Green Chemoprevention Chemoprevention - Resveratrol Chemoprevention - Resveratrol - Detrimental Climate Change - Extinction Climate Change - Extreme Weather; Droughts Climate Change - Food Production, Availability Climate Change - General Climate Change - Ozone Clinical Trials Coagulopathy Cognition Computing - Cloud Computing Computing - General Computing - Quantum Computing Computing - Software Corpora Crowdsourced Science Cryoprotection Cyberwarfare Deep Learning, Neural Networks Diet - Antioxidants, Flavonoids, Polyphenols Diet - Antioxidants, Flavonoids, Polyphenols - Detrimental Diet - Apples Diet - Calcium Diet - Celiac (Coeliac) Disease Diet - Cereals Diet - Cheese Diet - Chocolate Diet - Coffee, Tea Diet - Detrimental (Grapefruit juice, ...) Diet - Fats & Oils Diet - Fats - Omegas Diet - Fats - Omegas - Negative Effects Diet - Fiber Diet - Fish Diet - Food Guides Diet - Fruit, Vegetables, Berries Diet - Grains Diet - HCA (Heterocyclic Amines) Diet - Herbs Diet - Herbs - Detrimental Diet - HFCS (glucose-fructose in Canada) Diet - Honey Diet - Intermittent Fasting; 5:2 Diet Diet - Junk Food Diet - Meat Diet - Miscellaneous Diet - Nutrigenomics, Nutrition Diet - Nuts Diet - Organic Diet - Protein Diet - Salt, Hypertension Diet - Specific Diets (Mediterranean; ...) Diet - Spices Diet - Sugar, Carbohydrate (NOT HFCS) Diet - Supplements - Detrimental Diet - Supplements, Vitamins Diet - Sweeteners [Splenda; Stevia; ...] Diet - Vitamin D Diet - Vitamin E Diet - Wine DNA Damage DNA - Information Storage DNA - Misc DNA Repair DNA - Repeat Sequences [not telomeres] DNA Sequencing Dogs, Wolves Ecology; Environment - General Endocrine Disruptors Energy - Alternative (fuel cells; ...) Energy - Biofuels (incl. EtOH) Energy - Coal, Oil, Other Natural Resources Energy - Incandescent Bulb Phase-out Energy - Miscellaneous Energy - Nuclear Power Environment - Alberta Oil Sands Environmental Disasters Environmental Disasters - BP Oil Spill Environmental Disasters - Chernobyl (Chornobyl) Environmental Disasters - China Environmental Disasters - Haiti - Cholera Environmental Disasters - Hydrofracking Environmental Disasters - Japan 2011 Environmental Health, Toxicology Environment - Pollution Environment - Waste Management Epidemiology Epigenetics; DNA Methylation; Transgenerational Effects Ethics & Fraudulent Science Evolution Evolution - Speciation Exposome Forensic Science, Medicine Gene Expression Gene Therapy Genetic Engineering Genetic Engineering - CRISPR RNA-Guided Cas9 Nuclease, TALENs, TALEs Genetic Engineering - Gene Drive Genetic Engineering - MAGE, CAGE Genetic Regulation Genetics - De-extinction Genetics - Miscellaneous Genetic Testing GenMAPP 2 Genomes - Individual Genomes - Intra-Individual Variation Genomics Genomics - Cancer Genomes; TCGA; ... Genomics Databases Genomics - ENCODE, deCODE Genomics - FANTOM Genomics - Functional Genomics - Functional - XIST drwx------ 2 victoria victoria 4096 Aug 26 2015 Genomics - Gene Drive Genomics - GenomeBC, Genome Canada Genomics - Horizontal Gene, Disease Transfer Genomics - Metagenomics Genomics - Mosaicism Genomics - Penetrance Genomics - PPM (Personalized & Precision Medicine) Genomics - Privacy Genomics - Whole-Genome; Exome Geology Glycans, Glycoproteins, Carbohydrates Grants, Science Funding Graph Theory, Graphical Models Guides - Posters, Talks, Authorship, Review Hair, Skin Health - Addiction, Alcohol, Nicotine, Drug Abuse ... Health - Addiction - Vancouver Insite Health - Bone Health Care Health - Disease Health - Disease - Financial Cost Health - Disease - Genomic Variants Health - Exercise, Diet Health - Exercise - Yoga Health - Female Health - Helminths (parasitic worms) Health - Human-Related 'Horizontal' Disease Transfer Health - Infants, Juveniles Health - Male Health - Racial, Cultural, Geographic Differences Health - Sex Differences; Sexual Dimorphism Health - Skin Health - Surgery Health - Transgender Heterogeneity - Cellular, Genomic HIV, AIDS Hormones Illusion - Optical, ... Imaging - Quantum Dots Imaging Technology Immunity, Inflammation - General Immunity, Inflammation - Sepsis Immunity - TLR (Toll-Like Receptors) Information Theory Injury, Trauma, Pain, Treatment Intelligence - AI - General (Artificial Intelligence, A.I.) Intelligence - AI - IBM Watson Intelligence - Biological Interactomes Journals - Access Journals - Misc Journals - Quality, Peer Review ... Junk DNA (lncRNA, vlincRNA, ...), Pseudogenes ... Kinases, Phosphatases Language Lists2Networks Materials Science Materials Science - Biosensors; Sensors Materials Science - Plasmonic, Photonic Mathematics - Fractals Mathematics - General; Logic Mathematics - PDE (Partial Differential Equations) Membranes Metabolism - Amino Acids Metabolism - AMPK Metabolism - Blood, Cardiovascular Metabolism - Carbohydrate, Sugar Metabolism - Cilia, Intraflagellar Transport, Tubulin Metabolism - Circadian Rhythms; Chronobiology Metabolism - Copper Metabolism - Diabetes Metabolism - DNA (Replication, ...) Metabolism - Energy [not Metabolic Syndrome] Metabolism - Glymphatic System Metabolism - Iron Metabolism - Lipids, Fatty Acids Metabolism - Metabolizers (Individual Differences) Metabolism - Miscellaneous Metabolism - Models Metabolism - NAD+, NADH, NADPH Metabolism - Obesity, Metabolic Disease Metabolism - Proteins Metabolism - Sleep Metabolome Microarrays Microbes - Archaebacteria; Extremophiles Microbes - Behavior Caused By Microbes - Biofilms, Quorum Sensing Microbes - Bioremediation Microbes - E. coli outbreak - Europe 2011 Microbes - Fecal Microbial Transplantation (FMT) Microbes - Fungi, Yeast Microbes - Microbial Forensics Microbes - Microbiome Microbes - Microbiome - Nonhuman Microbes - Miscellaneous Microbes - Pathogens, Parasites Microbes - Pathogens, Parasites - Ebola Microbes - Probiotic Microbes - Virome Microbes - Viruses Microfluidics Military, Terrorism Mitochondria; Mitochondrial Genetics, Disease mRNA Display Music - Science-Related Mutation (Mutagenesis, Mutation Rates; ...) Mutation - Silent (Synonymous, 'Neutral') Nanoparticles Nanotechnology Network Modelling - Metabolic Neuroscience - Connectome Neuroscience - Memory, Learning Neuroscience, Neurobiology NGS - de novo Assembly NGS (Next-Generation Sequencing) NLM - Correspondence (PubMed, PMC ...) NLM - PubMed, PMC ... Oceanography ODE (Ordinary Differential Equations) OHS (Occupational Health & Safety) 'Omics - Single-Cell 'Omics - Various Other Ontologies [Gene Ontology ...] Optogenetics Origin of Life Pathway Analysis - Various Pathway Interaction Database PCR - Methods Peer Review; Open Science People - Craig Venter People - George Church People - Michael P. Snyder People - Noam Chomsky Pharmaceutical Pharmaceutical - Ibuprofen Pharmaceutical - Metformin Phenome Pheromones Phylogeny Physics Physics - Antimatter Physics - Holographic Universe Plants Plants - Genetics, Genomics Pollution Polymerases Privacy Proteins - Chaperones; Folding, Mis-Folding, HSP Proteins - Enzymes Proteins - Miscellaneous Proteins - Prions Proteome Psychology Psychology - Genetics Psychology - Light, Color Quantitative Biology RDF, Triples, Predications (PAS), SPARQL ... Ribosomes RNA - Exosomes RNA - mRNA; miRNA; siRNA; RNAi; crRNA; lncRNA; ... Robotics Rodents Rodents - Mole Rats Science Communication Science Policy Science, Research - Miscellaneous Senses - Smell; Olfaction; Taste, Hearing, Deafness; Touch SETI; Extra-Terrestrial Life Sex Determination, Gender Identity Sirtuins Social Media, Networking, Psychology, Trends ... Space, Cosmology Statistics, Probability Statistics - Shoddy Stem Cells Stress - Environmental (Heat; Cold; ...) Stress - Hypoxia; Anoxia Stress - Oxidative (ROS ...) Stress - Physiological, Cellular - ER Stress (Endoplasmic Reticulum) Stress - Physiological, Cellular - General Stress - PTSD Stress - UPR (Unfolded Protein Response) Synthetic Biology Synthetic Biology - Computing Synthetic Biology - Synthetic Life Systems Biology Telomeres; Telomere-Related Ageing Toxicology Transcription - Enhancers Transcription Factors - NF-κB (NFkB) Transcription Factors - Nrf2 Transcription, Transcription Factors, Translation Transcriptome Transcriptome - CAGE Transcriptome - FISSEQ Transcriptome - RNA-seq Translational Science, Medicine Transposons USACEHR-Relevant Literature Vaccines Vision, Eyes, Sight Wasps Women in Science, Medicine [victoria@victoria 2_RESEARCH - NEWS]$